Curated BLAST for Genomes

 

Curated BLAST

Searching in Thermophagus xiamenensis HS1 (GCF_000220155.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thermophagus xiamenensis HS1, or try another query

ilvB GQW_RS0101510 WP_010526300.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

47% id,
98% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

44% id,
94% cov

menD GQW_RS0104265 WP_010526792.1: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
is similar to:
PaperBLAST

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

23% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory