Curated BLAST for Genomes

 

Curated BLAST

Searching in Pyrolobus fumarii 1A (GCF_000223395.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pyrolobus fumarii 1A, or try another query

ilvC PYRFU_RS07845 Pyrfu_1598 WP_014027132.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

Q4J8K9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Sulfolobus acidocaldarius

61% id,
98% cov

E0SRA9: ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Ignisphaera aggregans

59% id,
98% cov

D3PT81: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Meiothermus ruber

56% id,
96% cov

More...

PYRFU_RS07240 Pyrfu_1472 WP_014027007.1: bifunctional chorismate mutase/prephenate dehydrogenase
is similar to:
PaperBLAST

Q4J8K9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Sulfolobus acidocaldarius

24% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory