Curated BLAST for Genomes

 

Curated BLAST

Searching in Pyrolobus fumarii 1A (GCF_000223395.1)

Found 63 curated entries in PaperBLAST's database that match '2.3.1.9' as complete word(s).

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pyrolobus fumarii 1A, or try another query

PYRFU_RS06655 Pyrfu_1356 WP_014026891.1: thiolase family protein
is similar to:
PaperBLAST

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

56% id,
100% cov

A4YEH9: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Metallosphaera sedula

50% id,
99% cov

THIL_SYNY3 / P73825: Acetyl-CoA acetyltransferase; Beta-ketothiolase PhaA; EC 2.3.1.9 from Synechocystis sp.

47% id,
100% cov

More...

PYRFU_RS03770 Pyrfu_0766 WP_014026312.1: thiolase family protein
is similar to:
PaperBLAST

I3R3D1: acetyl-CoA C-acetyltransferase (subunit 2/2) (EC 2.3.1.9) from Haloferax mediterranei

32% id,
99% cov

A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Methanothermococcus thermolithotrophicus

35% id,
90% cov

I3RA72: acetyl-CoA C-acetyltransferase (subunit 2/2) (EC 2.3.1.9) from Haloferax mediterranei

30% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory