Curated BLAST for Genomes

 

Curated BLAST

Searching in Pyrolobus fumarii 1A (GCF_000223395.1)

Found 24 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pyrolobus fumarii 1A, or try another query

hemL PYRFU_RS06770 Pyrfu_1380 WP_014026915.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

31% id,
90% cov

PYRFU_RS08035 Pyrfu_1633 WP_244403844.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

26% id,
97% cov

Q9FN30: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

26% id,
93% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
92% cov

More...

PYRFU_RS02975 Pyrfu_0606 WP_014026152.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

24% id,
96% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

23% id,
92% cov

Q67Y55: tyrosine transaminase (EC 2.6.1.5) from Arabidopsis thaliana

23% id,
83% cov

PYRFU_RS04640 Pyrfu_0933 WP_014026479.1: vWA domain-containing protein
is similar to:
PaperBLAST

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

31% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory