Curated BLAST for Genomes

 

Curated BLAST

Searching in Pyrolobus fumarii 1A (GCF_000223395.1)

Found 8 curated entries in PaperBLAST's database that match '3.5.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pyrolobus fumarii 1A, or try another query

PYRFU_RS05160 Pyrfu_1037 WP_014026582.1: M20 family metallo-hydrolase
is similar to:
PaperBLAST

ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC 3.5.1.16 from Dictyostelium discoideum

24% id,
66% cov

Q9C5C4: acetylornithine deacetylase (EC 3.5.1.16) from Arabidopsis thaliana

28% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory