Curated BLAST for Genomes

 

Curated BLAST

Searching in Pyrolobus fumarii 1A (GCF_000223395.1)

Found 17 curated entries in PaperBLAST's database that match '4.2.1.19' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pyrolobus fumarii 1A, or try another query

PYRFU_RS08460 Pyrfu_1723 WP_014027255.1: imidazoleglycerol-phosphate dehydratase
is similar to:
PaperBLAST

HIS7_MYCTU / P9WML9: Imidazoleglycerol-phosphate dehydratase; IGPD; EC 4.2.1.19 from Mycobacterium tuberculosis

41% id,
93% cov

BPHYT_RS17700: imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) from Burkholderia phytofirmans

38% id,
96% cov

HIS7_CRYNJ / P0CO22: Imidazoleglycerol-phosphate dehydratase; IGPD; EC 4.2.1.19 from Cryptococcus neoformans

38% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory