Curated BLAST for Genomes

 

Curated BLAST

Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)

Found 52 curated entries in PaperBLAST's database that match '3.1.3.3' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Lentibacillus jeotgali Grbi, or try another query

ON01_RS02365 LGRBI_RS0102530 WP_010529414.1: PP2C family protein-serine/threonine phosphatase
is similar to:
PaperBLAST

RSBU_BACSU / P40399: Phosphoserine phosphatase RsbU; Sigma factor SigB regulation protein RsbU; EC 3.1.3.3 from Bacillus subtilis
P40399: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

55% id,
98% cov

ON01_RS04145 LGRBI_RS0104415 WP_010529737.1: HAD family hydrolase
is similar to:
PaperBLAST

PSP_BACSU / P94512: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Bacillus subtilis

52% id,
100% cov

PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus

36% id,
100% cov

ON01_RS02385 LGRBI_RS0102550 WP_010529418.1: SpoIIE family protein phosphatase
is similar to:
PaperBLAST

RSBX_BACSU / P17906: Phosphoserine phosphatase RsbX; Sigma-B negative effector; EC 3.1.3.3 from Bacillus subtilis
P17906: phosphoserine phosphatase (EC 3.1.3.3) from Bacillus subtilis

35% id,
96% cov

ON01_RS01340 LGRBI_RS0101415 WP_010529210.1: histidine phosphatase family protein
is similar to:
PaperBLAST

ABIE51_RS06160: phosphoserine phosphatase (EC 3.1.3.3) from Lysobacter sp.

38% id,
74% cov

SERCL_ARATH / F4KI56: Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3 from Arabidopsis thaliana

31% id,
84% cov

ON01_RS17305 LGRBI_RS0118410 WP_010532280.1: TIGR01457 family HAD-type hydrolase
is similar to:
PaperBLAST

ARAL_BACSU / P94526: Sugar-phosphatase AraL; Arabinose operon protein AraL; Phosphoserine phosphatase; EC 3.1.3.23; EC 3.1.3.3 from Bacillus subtilis

28% id,
91% cov

ON01_RS05490 LGRBI_RS0105845 WP_010530008.1: histidine phosphatase family protein
is similar to:
PaperBLAST

PSPB_HYDTT / D3DFP8: Putative phosphoserine phosphatase 2; PSP 2; PSPase 2; Metal-independent phosphoserine phosphatase 2; iPSP2; O-phosphoserine phosphohydrolase 2; EC 3.1.3.3 from Hydrogenobacter thermophilus
D3DFP8: phosphoserine phosphatase (EC 3.1.3.3) from Hydrogenobacter thermophilus

29% id,
85% cov

ON01_RS13975 LGRBI_RS0114865 WP_010531689.1: Cof-type HAD-IIB family hydrolase
is similar to:
PaperBLAST

SERB_METJA / Q58989: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Methanocaldococcus jannaschii
Q58989: phosphoserine phosphatase (EC 3.1.3.3) from Methanocaldococcus jannaschii

31% id,
75% cov

SERB_STRT2 / Q5M3B3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptococcus thermophilus

29% id,
47% cov

SERB_IDILO / Q5QXU4: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Idiomarina loihiensis

32% id,
41% cov

More...

ON01_RS12600 LGRBI_RS0113395 WP_010531412.1: Cof-type HAD-IIB family hydrolase
is similar to:
PaperBLAST

SERB_ALBFT / Q21YU0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Albidiferax ferrireducens

25% id,
90% cov

SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis

34% id,
50% cov

SERB_WOLSU / Q7M7U5: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Wolinella succinogenes

37% id,
33% cov

More...

ON01_RS01025 LGRBI_RS0101090 WP_029328934.1: HAD-IA family hydrolase
is similar to:
PaperBLAST

PSP_THET2 / Q72H00: Phosphoserine phosphatase; PSP; EC 3.1.3.3 from Thermus thermophilus

27% id,
63% cov

serA ON01_RS04150 LGRBI_RS0104420 WP_010529738.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

29% id,
56% cov

CA265_RS22635: phosphoserine phosphatase (EC 3.1.3.3) from Pedobacter sp.

25% id,
30% cov

ON01_RS15330 LGRBI_RS0116300 WP_010531959.1: hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

29% id,
50% cov

ON01_RS14390 LGRBI_RS0115310 WP_010531772.1: Cof-type HAD-IIB family hydrolase
is similar to:
PaperBLAST

SERB_IDILO / Q5QXU4: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Idiomarina loihiensis

42% id,
32% cov

SERB_ECOLI / P0AGB0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Escherichia coli
SerB / b4388: phosphoserine phosphatase (EC 3.1.3.3) from Escherichia coli
serB: phosphoserine phosphatase; EC 3.1.3.3 from Escherichia coli
serB / P0AGB0: phosphoserine phosphatase (EC 3.1.3.3) from Escherichia coli

33% id,
25% cov

ON01_RS03845 LGRBI_RS0104085 WP_010529692.1: D-2-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis

26% id,
40% cov

ON01_RS16385 LGRBI_RS0117420 WP_010532094.1: Cof-type HAD-IIB family hydrolase
is similar to:
PaperBLAST

SERB_LACLA / Q9CHW3: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Lactococcus lactis

32% id,
33% cov

SERB_STRCO / Q9S281: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptomyces coelicolor

33% id,
13% cov

ON01_RS05030 LGRBI_RS0105375 WP_010529918.1: HAD family hydrolase
is similar to:
PaperBLAST

SERB_STRCO / Q9S281: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Streptomyces coelicolor

35% id,
21% cov

ON01_RS14060 LGRBI_RS0114950 WP_010531706.1: Cof-type HAD-IIB family hydrolase
is similar to:
PaperBLAST

SERB_ECOLI / P0AGB0: Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3 from Escherichia coli
SerB / b4388: phosphoserine phosphatase (EC 3.1.3.3) from Escherichia coli
serB: phosphoserine phosphatase; EC 3.1.3.3 from Escherichia coli
serB / P0AGB0: phosphoserine phosphatase (EC 3.1.3.3) from Escherichia coli

34% id,
20% cov

ON01_RS16255 LGRBI_RS0117280 WP_010532066.1: HAD family hydrolase
is similar to:
PaperBLAST

SERB2_MYCTU / O53289: Phosphoserine phosphatase SerB2; PSP; PSPase; O-phosphoserine phosphohydrolase; Protein-serine/threonine phosphatase; EC 3.1.3.3; EC 3.1.3.16 from Mycobacterium tuberculosis
O53289: phosphoserine phosphatase (EC 3.1.3.3) from Mycobacterium tuberculosis

31% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

49839-50615 (frame +3) on NZ_AGAV01000023.1 Lentibacillus jeotgali strain Grbi contig023, whole genome shotgun sequence
is similar to:
PaperBLAST

ARAL_BACSU / P94526: Sugar-phosphatase AraL; Arabinose operon protein AraL; Phosphoserine phosphatase; EC 3.1.3.23; EC 3.1.3.3 from Bacillus subtilis
Also see hits to annotated proteins above

28% id,
94% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory