Curated BLAST for Genomes

 

Curated BLAST

Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)

Found 241 curated entries in PaperBLAST's database that match '3.2.1.26' as complete word(s).

These curated entries have 195 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Lentibacillus jeotgali Grbi, or try another query

ON01_RS14395 LGRBI_RS0115315 WP_010531774.1: sucrose-6-phosphate hydrolase
is similar to:
PaperBLAST

Q65DN5: beta-fructofuranosidase (EC 3.2.1.26) from Bacillus licheniformis

49% id,
97% cov

AAB38976.1: invertase (SurA) (EC 3.2.1.26)

51% id,
91% cov

SCRB_BACSU / P07819: Sucrose-6-phosphate hydrolase; Sucrase; Invertase; EC 3.2.1.26 from Bacillus subtilis

48% id,
96% cov

More...

treC ON01_RS02165 LGRBI_RS0102295 WP_010529372.1: alpha,alpha-phosphotrehalase
is similar to:
PaperBLAST

ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum

28% id,
32% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

321509-323191 (frame +2) on NZ_AGAV01000003.1 Lentibacillus jeotgali strain Grbi contig003, whole genome shotgun sequence
is similar to:
PaperBLAST

ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum
Also see hits to annotated proteins above

27% id,
33% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory