Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)
Found 15 curated entries in PaperBLAST's database that match '4.1.2.55' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Lentibacillus jeotgali Grbi, or try another query
| eda ON01_RS05400 LGRBI_RS0105755 WP_010529990.1: bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase is similar to: | PaperBLAST |
TM0066 / Q9WXS1: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima | 39% id, 95% cov |
YidU / b4477: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.55; EC 4.1.2.21) from Escherichia coli | 33% id, 100% cov |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 27% id, 94% cov |
| ON01_RS08095 LGRBI_RS0108705 WP_010530529.1: bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase is similar to: | PaperBLAST |
TM0066 / Q9WXS1: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima | 39% id, 94% cov |
kdgA / P38448: 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii | 33% id, 92% cov |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 32% id, 88% cov |
| ON01_RS13915 LGRBI_RS0114805 WP_010531677.1: N-acetylneuraminate lyase is similar to: | PaperBLAST |
KDGA_SULAC / Q4JC35: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Sulfolobus acidocaldarius | 29% id, 95% cov |
KDGA_SACSO / O54288: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus | 27% id, 92% cov |
KDGA_SACS2 / Q97U28: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus | 27% id, 88% cov |
| ON01_RS05690 LGRBI_RS0106085 WP_010530050.1: dihydrodipicolinate synthase family protein is similar to: | PaperBLAST |
KDGA_SACSO / O54288: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus | 27% id, 93% cov |
KDGA_SULTO / F9VPG1: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Sulfurisphaera tokodaii | 26% id, 94% cov |
KDGA_SACS2 / Q97U28: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Saccharolobus solfataricus | 27% id, 88% cov |
| dapA ON01_RS08885 LGRBI_RS0109530 WP_010530679.1: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
KDGA_SULAC / Q4JC35: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Sulfolobus acidocaldarius | 24% id, 96% cov |
| dapA ON01_RS12820 LGRBI_RS0113640 WP_010531457.1: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
KDGA_SULAC / Q4JC35: 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.55 from Sulfolobus acidocaldarius | 22% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory