Curated BLAST for Genomes

 

Curated BLAST

Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)

Found 1 curated entries in PaperBLAST's database that match '4.2.1.52' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Lentibacillus jeotgali Grbi, or try another query

dapA ON01_RS12820 LGRBI_RS0113640 WP_010531457.1: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

58% id,
99% cov

dapA ON01_RS08885 LGRBI_RS0109530 WP_010530679.1: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

58% id,
98% cov

ON01_RS13915 LGRBI_RS0114805 WP_010531677.1: N-acetylneuraminate lyase
is similar to:
PaperBLAST

dapA2: dihydrodipicolinate synthase; EC 4.2.1.52 from Bacillus anthracis

25% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory