Curated BLAST for Genomes

 

Curated BLAST

Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)

Found 90 curated entries in PaperBLAST's database that match '5.3.1.1' as complete word(s).

These curated entries have 57 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Lentibacillus jeotgali Grbi, or try another query

tpiA ON01_RS16710 LGRBI_RS0117775 WP_010532161.1: triose-phosphate isomerase
is similar to:		 PaperBLAST

P35144: triose-phosphate isomerase (EC 5.3.1.1) from Priestia megaterium

 61% id,
100% cov

TPIS_BACCE / Q4MQ55: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Bacillus cereus

 60% id,
99% cov

TPIS_GEOSE / P00943: Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 from Geobacillus stearothermophilus
P00943: triose-phosphate isomerase (EC 5.3.1.1) from Geobacillus stearothermophilus

 60% id,
99% cov

More...

ON01_RS16705 LGRBI_RS0117770 WP_010532160.1: phosphoglycerate kinase
is similar to:		 PaperBLAST

PGKT_THEMA / P36204: Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1 from Thermotoga maritima
pgk / P36204: Pgk (EC 2.7.2.3; EC 5.3.1.1) from Thermotoga maritima
P36204: triose-phosphate isomerase (EC 5.3.1.1) from Thermotoga maritima

 56% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory