Curated BLAST for Genomes

 

Curated BLAST

Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)

Found 118 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 86 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Lentibacillus jeotgali Grbi, or try another query

glnA ON01_RS05550 LGRBI_RS0105905 WP_010530020.1: type I glutamate--ammonia ligase
is similar to:
PaperBLAST

GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis
P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis

78% id,
99% cov

C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.

74% id,
99% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

59% id,
99% cov

More...

glnA ON01_RS09045 LGRBI_RS0109700 WP_010530711.1: type I glutamate--ammonia ligase
is similar to:
PaperBLAST

GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis
P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis

78% id,
99% cov

C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.

73% id,
99% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

58% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory