Curated BLAST for Genomes

 

Curated BLAST

Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)

Found 61 curated entries in PaperBLAST's database that match 'Serine hydroxymethyltransferase' as complete word(s).

These curated entries have 49 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Lentibacillus jeotgali Grbi, or try another query

glyA ON01_RS13415 LGRBI_RS0114285 WP_010531577.1: serine hydroxymethyltransferase
is similar to:
PaperBLAST

1kkjA / Q7SIB6: Crystal structure of serine hydroxymethyltransferase from b.Stearothermophilus

74% id,
100% cov

GLYA_BACSU / P39148: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Bacillus subtilis

73% id,
99% cov

GLYA_STAAC / Q5HE87: Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1 from Staphylococcus aureus

69% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory