Curated BLAST for Genomes

 

Curated BLAST

Searching in Lentibacillus jeotgali Grbi (GCF_000224785.1)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Lentibacillus jeotgali Grbi, or try another query

trpE ON01_RS01750 LGRBI_RS0101845 WP_010529287.1: anthranilate synthase component I
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

43% id,
97% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

42% id,
92% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

40% id,
95% cov

More...

ON01_RS17455 LGRBI_RS0118560 WP_010532310.1: isochorismate synthase
is similar to:
PaperBLAST

trpE / Q08653: anthranilate synthase component I (EC 4.1.3.27) from Thermotoga maritima

28% id,
80% cov

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

32% id,
55% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

31% id,
53% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory