Searching in Collinsella tanakaei YIT 12063 (GCF_000225705.1)
Found 6 curated entries in PaperBLAST's database that match '1.1.3.21' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Collinsella tanakaei YIT 12063, or try another query
| HMPREF9452_RS02725 HMPREF9452_00537 WP_009140573.1: NAD(P)/FAD-dependent oxidoreductase is similar to: | PaperBLAST |
glpO: glycerol-3-phosphate oxidase; EC 1.1.3.21 from Mycoplasma mycoides | 31% id, 96% cov |
| HMPREF9452_RS02730 HMPREF9452_00538 WP_009140574.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus | 34% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 547790-549253 (frame +2) on NZ_JH126467.1 Collinsella tanakaei YIT 12063 supercont1.1, whole genome shotgun sequence is similar to: | PaperBLAST |
GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus | 31% id, 16% cov |
| 7266-9011 (frame -3) on NZ_JH126467.1 Collinsella tanakaei YIT 12063 supercont1.1, whole genome shotgun sequence is similar to: | PaperBLAST |
GLPO_ENTCA / O86963: Alpha-glycerophosphate oxidase; Glycerol-3-phosphate oxidase; EC 1.1.3.21 from Enterococcus casseliflavus | 38% id, 9% cov |
Lawrence Berkeley National Laboratory