Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides faecis MAJ27 (GCF_000226135.1)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides faecis MAJ27, or try another query

KCY_RS0113740 WP_010537645.1: FGGY-family carbohydrate kinase
is similar to:
PaperBLAST

BT0350: ribulokinase (EC 2.7.1.16) from Bacteroides thetaiotaomicron

99% id,
100% cov

xylB KCY_RS0109525 WP_010537012.1: xylulokinase
is similar to:
PaperBLAST

ARAB_BACSU / P94524: Ribulokinase; EC 2.7.1.16 from Bacillus subtilis

24% id,
95% cov

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

22% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory