Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodanobacter denitrificans 2APBS1 (GCF_000230695.2)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Rhodanobacter denitrificans 2APBS1, or try another query

R2APBS1_RS11660 R2APBS1_2390 WP_007508973.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

53% id,
98% cov

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

41% id,
96% cov

Q95NP6: kynurenine 3-monooxygenase (EC 1.14.13.9) from Tribolium castaneum

38% id,
94% cov

More...

R2APBS1_RS15770 R2APBS1_3248 WP_015448694.1: UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
is similar to:
PaperBLAST

Q95NP6: kynurenine 3-monooxygenase (EC 1.14.13.9) from Tribolium castaneum

26% id,
77% cov

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

24% id,
79% cov

sibC / C0LTL7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Streptosporangium sibiricum

25% id,
77% cov

More...

ubiH R2APBS1_RS15775 R2APBS1_3249 WP_015448695.1: 2-octaprenyl-6-methoxyphenyl hydroxylase
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

29% id,
53% cov

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

26% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory