Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodanobacter denitrificans 2APBS1 (GCF_000230695.2)

Found 10 curated entries in PaperBLAST's database that match '4.1.1.45' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Rhodanobacter denitrificans 2APBS1, or try another query

R2APBS1_RS05970 R2APBS1_1218 WP_007510589.1: amidohydrolase family protein
is similar to:
PaperBLAST

ACMSD_MOUSE / Q8R519: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Mus musculus
Q8R519: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Mus musculus

52% id,
100% cov

ACMSD_RAT / Q8R5M5: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Rattus norvegicus
Q8R5M5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Rattus norvegicus

51% id,
100% cov

ACMSD_HUMAN / Q8TDX5: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Picolinate carboxylase; EC 4.1.1.45 from Homo sapiens
ACMSD / Q8TDX5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens
Q8TDX5: aminocarboxymuconate-semialdehyde decarboxylase (EC 4.1.1.45) from Homo sapiens

51% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory