Searching in Rhodanobacter denitrificans 2APBS1 (GCF_000230695.2)
Found 20 curated entries in PaperBLAST's database that match '5.4.2.7' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Rhodanobacter denitrificans 2APBS1, or try another query
| R2APBS1_RS14130 R2APBS1_2909 WP_015448445.1: phosphopentomutase is similar to: | PaperBLAST |
SO1219: Phosphopentomutase (EC 5.4.2.7) from Shewanella oneidensis | 56% id, 100% cov |
DEOB_ECOLI / P0A6K6: Phosphopentomutase; Phosphodeoxyribomutase; Phosphoribomutase; EC 5.4.2.7 from Escherichia coli | 52% id, 100% cov |
Dshi_0829: Phosphopentomutase (EC 5.4.2.7) from Dinoroseobacter shibae | 52% id, 100% cov |
| R2APBS1_RS02830 R2APBS1_0585 WP_015446802.1: phosphomannomutase/phosphoglucomutase is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 27% id, 94% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 27% id, 52% cov |
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus | 30% id, 30% cov |
| R2APBS1_RS20600 R2APBS1_3851 WP_015449135.1: phosphomannomutase/phosphoglucomutase is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 34% id, 64% cov |
| glmM R2APBS1_RS10425 R2APBS1_2133 WP_007508193.1: phosphoglucosamine mutase is similar to: | PaperBLAST |
PPM_THEKO / Q6I7B6: Phosphopentomutase; PPM; EC 5.4.2.7 from Thermococcus kodakarensis | 32% id, 67% cov |
PGM3_SCHPO / O74478: Probable phosphoribomutase; PRM; Phosphoglucomutase 3 homolog; PGM 3 homolog; EC 5.4.2.7 from Schizosaccharomyces pombe | 22% id, 52% cov |
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus | 25% id, 45% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory