Curated BLAST for Genomes

 

Curated BLAST

Searching in Saccharomonospora marina XMU15 (GCF_000244955.1)

Found 31 curated entries in PaperBLAST's database that match '1.1.1.28' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Saccharomonospora marina XMU15, or try another query

SACMADRAFT_RS08490 SacmaDRAFT_1738 WP_009153392.1: D-glycerate dehydrogenase
is similar to:		 PaperBLAST

2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera

 42% id,
85% cov

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

 37% id,
81% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

 35% id,
85% cov

More...

SACMADRAFT_RS21065 SacmaDRAFT_4305 WP_009155870.1: FAD-binding oxidoreductase
is similar to:		 PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 34% id,
99% cov

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

 31% id,
93% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 30% id,
74% cov

SACMADRAFT_RS27505 SacmaDRAFT_5619 WP_009157109.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:		 PaperBLAST

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

 35% id,
94% cov

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 31% id,
99% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 33% id,
75% cov

serA SACMADRAFT_RS06215 SacmaDRAFT_1270 WP_009152937.1: phosphoglycerate dehydrogenase
is similar to:		 PaperBLAST

F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus

 37% id,
86% cov

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

 40% id,
73% cov

Q8EI78: D-lactate dehydrogenase (EC 1.1.1.28) from Shewanella oneidensis

 35% id,
80% cov

More...

SACMADRAFT_RS06575 SacmaDRAFT_1343 WP_009153008.1: 2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

 37% id,
84% cov

O83080: D-lactate dehydrogenase (EC 1.1.1.28) from Treponema pallidum

 27% id,
97% cov

F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus

 33% id,
78% cov

More...

SACMADRAFT_RS02295 SacmaDRAFT_0471 WP_009152163.1: FAD-linked oxidase C-terminal domain-containing protein
is similar to:		 PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 31% id,
99% cov

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

 30% id,
93% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 29% id,
77% cov

SACMADRAFT_RS16515 SacmaDRAFT_3370 WP_009154977.1: D-2-hydroxyacid dehydrogenase family protein
is similar to:		 PaperBLAST

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

 34% id,
87% cov

F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus

 32% id,
91% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

 30% id,
96% cov

More...

SACMADRAFT_RS06040 SacmaDRAFT_1235 WP_009152904.1: FAD-binding and (Fe-S)-binding domain-containing protein
is similar to:		 PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 29% id,
99% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 28% id,
47% cov

SACMADRAFT_RS21020 SacmaDRAFT_4295 WP_009155860.1: D-2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

 30% id,
90% cov

F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus

 31% id,
89% cov

Q8RG11: D-lactate dehydrogenase (EC 1.1.1.28) from Fusobacterium nucleatum

 26% id,
90% cov

More...

SACMADRAFT_RS23070 SacmaDRAFT_4714 WP_009156266.1: FAD-binding oxidoreductase
is similar to:		 PaperBLAST

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

 27% id,
87% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 25% id,
77% cov

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 38% id,
11% cov

SACMADRAFT_RS06175 SacmaDRAFT_1262 WP_040925573.1: 2-hydroxyacid dehydrogenase
is similar to:		 PaperBLAST

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

 26% id,
89% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

 34% id,
61% cov

O83080: D-lactate dehydrogenase (EC 1.1.1.28) from Treponema pallidum

 29% id,
71% cov

More...

SACMADRAFT_RS02290 SacmaDRAFT_0470 WP_009152162.1: FAD-binding protein
is similar to:		 PaperBLAST

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

 29% id,
70% cov

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 32% id,
50% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 29% id,
54% cov

SACMADRAFT_RS05330 SacmaDRAFT_1090 WP_009152761.1: FAD-binding and (Fe-S)-binding domain-containing protein
is similar to:		 PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

 26% id,
69% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

 24% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory