Curated BLAST for Genomes

 

Curated BLAST

Searching in Saccharomonospora marina XMU15 (GCF_000244955.1)

Found 18 curated entries in PaperBLAST's database that match '2.7.1.45' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Saccharomonospora marina XMU15, or try another query

SACMADRAFT_RS19930 SacmaDRAFT_4073 WP_009155646.1: sugar kinase
is similar to:
PaperBLAST

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

42% id,
97% cov

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

36% id,
95% cov

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

36% id,
94% cov

More...

iolC SACMADRAFT_RS24195 SacmaDRAFT_4943 WP_009156492.1: 5-dehydro-2-deoxygluconokinase
is similar to:
PaperBLAST

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

31% id,
89% cov

D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

28% id,
97% cov

SACMADRAFT_RS23105 SacmaDRAFT_4724 WP_009156276.1: carbohydrate kinase
is similar to:
PaperBLAST

D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

28% id,
97% cov

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

28% id,
93% cov

SACMADRAFT_RS31140 SacmaDRAFT_5757 WP_040926917.1: ribokinase
is similar to:
PaperBLAST

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

29% id,
95% cov

KDGK_THETE / Q704D0: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoproteus tenax

32% id,
84% cov

D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

29% id,
86% cov

More...

SACMADRAFT_RS07170 SacmaDRAFT_1464 WP_009153126.1: carbohydrate kinase family protein
is similar to:
PaperBLAST

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

28% id,
89% cov

SACMADRAFT_RS23615 SacmaDRAFT_4826 WP_009156378.1: BadF/BadG/BcrA/BcrD ATPase family protein
is similar to:
PaperBLAST

KDGK_THEAC / Q9HLV3: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxy-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermoplasma acidophilum

28% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory