Searching in Saccharomonospora cyanea NA-134 (GCF_000244975.1)
Found 14 curated entries in PaperBLAST's database that match '4.2.1.25' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 14 relevant proteins in Saccharomonospora cyanea NA-134, or try another query
| SACCYDRAFT_RS19455 SaccyDRAFT_3986 WP_052309135.1: IlvD/Edd family dehydratase is similar to: | PaperBLAST |
PS417_11000: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas simiae | 48% id, 97% cov |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 48% id, 95% cov |
ARADA_AZOBR / Q1JUQ1: L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense | 49% id, 94% cov |
| ilvD SACCYDRAFT_RS04825 SaccyDRAFT_0985 WP_005454119.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARADA_AZOBR / Q1JUQ1: L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense | 39% id, 96% cov |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 39% id, 96% cov |
Pf6N2E2_609: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 39% id, 93% cov |
| ilvD SACCYDRAFT_RS13145 SaccyDRAFT_2705 WP_005456798.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARADA_AZOBR / Q1JUQ1: L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense | 41% id, 91% cov |
PS417_11000: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas simiae | 39% id, 94% cov |
AO356_24585: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 39% id, 94% cov |
| SACCYDRAFT_RS24380 SaccyDRAFT_5001 WP_005460340.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 36% id, 99% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 35% id, 91% cov |
| dgoD SACCYDRAFT_RS08135 SaccyDRAFT_1665 WP_005455259.1: galactonate dehydratase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 34% id, 96% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 35% id, 90% cov |
| ilvD SACCYDRAFT_RS05065 SaccyDRAFT_1034 WP_005454216.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARADA_AZOBR / Q1JUQ1: L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense | 31% id, 97% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 31% id, 90% cov |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 30% id, 93% cov |
| SACCYDRAFT_RS05525 SaccyDRAFT_1126 WP_005454392.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 31% id, 91% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 26% id, 92% cov |
| edd SACCYDRAFT_RS17845 SaccyDRAFT_3658 WP_232283698.1: phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 31% id, 86% cov |
HSERO_RS05205: L-arabonate dehydratase (EC 4.2.1.25) from Herbaspirillum seropedicae | 31% id, 86% cov |
Shewana3_2070: L-arabonate dehydratase (EC 4.2.1.25) from Shewanella sp. | 31% id, 83% cov |
| manD SACCYDRAFT_RS00140 SaccyDRAFT_0028 WP_005452453.1: D-mannonate dehydratase ManD is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 29% id, 88% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 27% id, 52% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 32% id, 37% cov |
| SACCYDRAFT_RS06310 SaccyDRAFT_1287 WP_005454615.1: enolase C-terminal domain-like protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 27% id, 92% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 26% id, 83% cov |
| manD SACCYDRAFT_RS11035 SaccyDRAFT_2255 WP_005456175.1: D-mannonate dehydratase ManD is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 28% id, 87% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 31% id, 38% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 30% id, 35% cov |
| SACCYDRAFT_RS05545 SaccyDRAFT_1130 WP_005454398.1: glucarate dehydratase family protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 25% id, 91% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 25% id, 88% cov |
| SACCYDRAFT_RS11130 SaccyDRAFT_2283 WP_005456225.1: enolase C-terminal domain-like protein is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 23% id, 95% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 24% id, 89% cov |
| SACCYDRAFT_RS08225 SaccyDRAFT_1683 WP_005455286.1: enolase C-terminal domain-like protein is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 23% id, 87% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2352575-2353834 (frame +2) on NZ_CM001440.1 Saccharomonospora cyanea NA-134 chromosome, whole genome shotgun sequence is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 24% id, 96% cov |
| 29015-30670 (frame -3) on NZ_CM001440.1 Saccharomonospora cyanea NA-134 chromosome, whole genome shotgun sequence is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 26% id, 60% cov |
Lawrence Berkeley National Laboratory