Curated BLAST for Genomes

 

Curated BLAST

Searching in Saccharomonospora cyanea NA-134 (GCF_000244975.1)

Found 11 curated entries in PaperBLAST's database that match '5.1.99.1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Saccharomonospora cyanea NA-134, or try another query

mce SACCYDRAFT_RS18435 SaccyDRAFT_3779 WP_005458501.1: methylmalonyl-CoA epimerase
is similar to:
PaperBLAST

mcee / A9WGS0: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Chloroflexus aurantiacus

41% id,
97% cov

K7SKA8: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Acidipropionibacterium acidipropionici

44% id,
88% cov

GI:18042134 / Q8VQN0: methylmalonyl CoA epimerase subunit (EC 5.1.99.1) from Propionibacterium freudenreichii

42% id,
92% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory