Curated BLAST for Genomes

 

Curated BLAST

Searching in Saccharomonospora cyanea NA-134 (GCF_000244975.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Saccharomonospora cyanea NA-134, or try another query

SACCYDRAFT_RS05075 SaccyDRAFT_1036 WP_043536172.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

69% id,
100% cov

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

50% id,
98% cov

gcl SACCYDRAFT_RS12715 SaccyDRAFT_2613 WP_005456689.1: glyoxylate carboligase
is similar to:
PaperBLAST

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

37% id,
92% cov

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

35% id,
93% cov

SACCYDRAFT_RS13645 SaccyDRAFT_2809 WP_005456961.1: thiamine pyrophosphate-requiring protein
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

30% id,
94% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

30% id,
92% cov

SACCYDRAFT_RS14865 SaccyDRAFT_3054 WP_005457307.1: pyruvate dehydrogenase
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

28% id,
96% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

27% id,
92% cov

SACCYDRAFT_RS19595 SaccyDRAFT_4014 WP_005458823.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

29% id,
88% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

36% id,
53% cov

SACCYDRAFT_RS19670 SaccyDRAFT_4029 WP_005458849.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

26% id,
93% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

27% id,
88% cov

SACCYDRAFT_RS09195 SaccyDRAFT_1882 WP_005455616.1: thiamine pyrophosphate-requiring protein
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

25% id,
82% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

29% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory