Searching in Megamonas funiformis YIT 11815 (GCF_000245775.1)
Found 5 curated entries in PaperBLAST's database that match '4.2.1.12' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Megamonas funiformis YIT 11815, or try another query
| ilvD HMPREF9454_RS09720 HMPREF9454_01976 WP_008539522.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 32% id, 90% cov |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 32% id, 90% cov |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 32% id, 88% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1322-3025 (frame -2) on NZ_JH601092.1 Megamonas funiformis YIT 11815 supercont1.3, whole genome shotgun sequence is similar to: | PaperBLAST |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 31% id, 95% cov |
Lawrence Berkeley National Laboratory