Curated BLAST for Genomes

 

Curated BLAST

Searching in Megamonas funiformis YIT 11815 (GCF_000245775.1)

Found 12 curated entries in PaperBLAST's database that match '4.2.1.43' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Megamonas funiformis YIT 11815, or try another query

dapA HMPREF9454_RS12060 HMPREF9454_02431 WP_008540148.1: 4-hydroxy-tetrahydrodipicolinate synthase
is similar to:
PaperBLAST

Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp.

26% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory