Curated BLAST for Genomes

 

Curated BLAST

Searching in Sporolactobacillus vineae DSM 21990 = SL153 (GCF_000246965.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Sporolactobacillus vineae DSM 21990 = SL153, or try another query

RH97_RS09765 SVIND2_RS10400 WP_010632185.1: ROK family glucokinase
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

53% id,
98% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

49% id,
98% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

49% id,
98% cov

More...

RH97_RS12875 SVIND2_RS13735 WP_010632787.1: ROK family protein
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

29% id,
98% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

25% id,
98% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

25% id,
98% cov

More...

RH97_RS06160 SVIND2_RS06550 WP_010631476.1: ROK family protein
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
98% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

26% id,
98% cov

H6UH58: glucokinase (EC 2.7.1.2) from Staphylococcus aureus

26% id,
95% cov

More...

mvk RH97_RS05935 SVIND2_RS06315 WP_010631430.1: mevalonate kinase
is similar to:
PaperBLAST

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

36% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory