Curated BLAST for Genomes

 

Curated BLAST

Searching in Microvirga lotononidis WSM3557 (GCF_000262405.1)

Found 21 curated entries in PaperBLAST's database that match '1.2.1.79' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Microvirga lotononidis WSM3557, or try another query

MICLODRAFT_RS20175 MicloDRAFT_00041830 WP_009763662.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

63% id,
99% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

56% id,
99% cov

A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii

55% id,
97% cov

More...

aldA MICLODRAFT_RS31070 MicloDRAFT_00064130 WP_009494164.1: aldehyde dehydrogenase
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

41% id,
96% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

39% id,
97% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

36% id,
99% cov

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MICLODRAFT_RS27600 MicloDRAFT_00057050 WP_052600717.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

39% id,
96% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

38% id,
97% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

36% id,
96% cov

More...

MICLODRAFT_RS03140 MicloDRAFT_00006590 WP_009762358.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

36% id,
100% cov

A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii

36% id,
96% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

35% id,
96% cov

More...

MICLODRAFT_RS05995 MicloDRAFT_00012610 WP_009490033.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

37% id,
96% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

36% id,
98% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

34% id,
96% cov

More...

MICLODRAFT_RS13925 MicloDRAFT_00028800 WP_245273007.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

36% id,
99% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

36% id,
96% cov

A0A1Q6BLU5: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Corynebacterium glutamicum

34% id,
99% cov

More...

MICLODRAFT_RS15125 MicloDRAFT_00031260 WP_009762628.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

36% id,
96% cov

A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii

35% id,
90% cov

GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis

32% id,
98% cov

More...

MICLODRAFT_RS11285 MicloDRAFT_00023490 WP_009491347.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

sad / Q8GAK7: succinate-semialdehyde dehydrogenase (NADP+) monomer (EC 1.2.1.79) from Paenarthrobacter nicotinovorans

33% id,
99% cov

Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.

30% id,
99% cov

GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis

31% id,
96% cov

More...

putA MICLODRAFT_RS28585 MicloDRAFT_00059040 WP_009493447.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

34% id,
96% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

32% id,
95% cov

A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Acinetobacter baumannii

33% id,
89% cov

More...

MICLODRAFT_RS25285 MicloDRAFT_00052350 WP_040639379.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

33% id,
98% cov

Q55585: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechocystis sp.

32% id,
100% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

32% id,
99% cov

More...

MICLODRAFT_RS17490 MicloDRAFT_00036300 WP_009763126.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis

32% id,
98% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

30% id,
98% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

30% id,
93% cov

More...

MICLODRAFT_RS17515 MicloDRAFT_00036350 WP_009763131.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

32% id,
98% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

33% id,
92% cov

SYNPCC7002_A2771 / B1XMM6: succinate-semialdehyde dehydrogenase monomer (EC 1.2.1.79) from Synechococcus sp.
B1XMM6: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Synechococcus sp.

30% id,
98% cov

More...

MICLODRAFT_RS25295 MicloDRAFT_00052370 WP_052600707.1: coniferyl aldehyde dehydrogenase
is similar to:
PaperBLAST

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

30% id,
89% cov

GABD1_MYCTU / P9WNX9: Succinate-semialdehyde dehydrogenase [NADP(+)] 1; SSADH 1; SSDH 1; EC 1.2.1.79 from Mycobacterium tuberculosis
gabD1 / P9WNX9: NADP-dependent succinate-semialdehyde dehydrogenase (EC 1.2.1.79) from Mycobacterium tuberculosis
P9WNX9: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Mycobacterium tuberculosis

27% id,
95% cov

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

34% id,
75% cov

More...

paaZ MICLODRAFT_RS27080 MicloDRAFT_00056020 WP_009493062.1: phenylacetic acid degradation bifunctional protein PaaZ
is similar to:
PaperBLAST

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

24% id,
97% cov

MICLODRAFT_RS01860 MicloDRAFT_00003980 WP_009489010.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

GABD_BACSU / P94428: Succinate-semialdehyde dehydrogenase [NADP(+)]; SSDH; EC 1.2.1.79 from Bacillus subtilis

34% id,
69% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.79) from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16); succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Cupriavidus necator

34% id,
69% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC 1.2.1.79; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79) from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC 1.2.1.79; EC 1.2.1.20) from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC 1.2.1.79) from Escherichia coli

34% id,
68% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory