Curated BLAST for Genomes

 

Curated BLAST

Searching in Algibacter luteus P7-3-5 (GCF_000283015.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Algibacter luteus P7-3-5, or try another query

P735_RS0103725 WP_019386666.1: carbohydrate kinase
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

39% id,
98% cov

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

35% id,
96% cov

G4T023: fructokinase (EC 2.7.1.4) from Methylotuvimicrobium alcaliphilum

33% id,
97% cov

More...

P735_RS0103660 WP_019386653.1: carbohydrate kinase
is similar to:
PaperBLAST

Q9FLH8: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

32% id,
92% cov

scrK / Q9ZHJ6: fructokinase (EC 2.7.1.4) from Clostridium beijerinckii

30% id,
99% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

29% id,
97% cov

More...

P735_RS0112595 WP_019388402.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

28% id,
98% cov

P735_RS0108605 WP_019387619.1: sugar kinase
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

20% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

305506-306447 (frame -1) on NZ_ALIH01000002.1 Algibacter luteus strain P7-3-5 contig002, whole genome shotgun sequence
is similar to:
PaperBLAST

Q9FLH8: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana
Also see hits to annotated proteins above

32% id,
94% cov

P37829: fructokinase (EC 2.7.1.4) from Solanum tuberosum
Also see hits to annotated proteins above

29% id,
94% cov

Q9C524: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana
Also see hits to annotated proteins above

30% id,
81% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory