Curated BLAST for Genomes

 

Curated BLAST

Searching in Algibacter luteus P7-3-5 (GCF_000283015.1)

Found 34 curated entries in PaperBLAST's database that match '5.3.1.8' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Algibacter luteus P7-3-5, or try another query

P735_RS0102870 WP_019386498.1: class I mannose-6-phosphate isomerase
is similar to:
PaperBLAST

MANA1_BACSU / O31646: Mannose-6-phosphate isomerase ManA; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

36% id,
94% cov

A4ITT1: mannose-6-phosphate isomerase (EC 5.3.1.8) from Geobacillus thermodenitrificans

34% id,
93% cov

MANA2_BACSU / O05511: Probable mannose-6-phosphate isomerase GmuF; Glucomannan utilization protein F; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

33% id,
94% cov

More...

P735_RS0100535 WP_026009879.1: mannose-6-phosphate isomerase
is similar to:
PaperBLAST

MANA1_BACSU / O31646: Mannose-6-phosphate isomerase ManA; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

35% id,
97% cov

Q9AGZ4: mannose-6-phosphate isomerase (EC 5.3.1.8) from Bacillus subtilis

33% id,
96% cov

MANA2_BACSU / O05511: Probable mannose-6-phosphate isomerase GmuF; Glucomannan utilization protein F; Phosphohexomutase; Phosphomannose isomerase; PMI; EC 5.3.1.8 from Bacillus subtilis

32% id,
96% cov

More...

glmM P735_RS0107910 WP_019387483.1: phosphoglucosamine mutase
is similar to:
PaperBLAST

ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii

31% id,
99% cov

P735_RS0101475 WP_026009899.1: mannose-1-phosphate guanylyltransferase
is similar to:
PaperBLAST

PH0925 / O58649: GDP-D-mannose pyrophosphorylase (EC 2.7.7.13; EC 5.3.1.8) from Pyrococcus horikoshii

34% id,
75% cov

ALGA_PSEAE / P07874: Alginate biosynthesis protein AlgA; EC 5.3.1.8; EC 2.7.7.13 from Pseudomonas aeruginosa
algA / P07874: phosphomannose isomerase (EC 5.3.1.8; EC 2.7.7.13) from Pseudomonas aeruginosa

31% id,
71% cov

algA / GI|31296823: alginate biosynthesis protein AlgA; EC 2.7.7.13; EC 5.3.1.8 from Pseudomonas fluorescens

31% id,
72% cov

P735_RS0105970 WP_019387104.1: phospho-sugar mutase
is similar to:
PaperBLAST

ST0242 / Q976E4: hexose-6-phosphate mutase/isomerase (EC 5.3.1.8; EC 5.3.1.9; EC 5.4.2.10; EC 5.4.2.13) from Sulfurisphaera tokodaii

25% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory