Curated BLAST for Genomes

 

Curated BLAST

Searching in Algibacter luteus P7-3-5 (GCF_000283015.1)

Found 29 curated entries in PaperBLAST's database that match 'sorbitol dehydrogenase' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Algibacter luteus P7-3-5, or try another query

fabG P735_RS0113740 WP_019388626.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

41% id,
98% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

36% id,
98% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

34% id,
98% cov

More...

P735_RS0114205 WP_019388714.1: SDR family oxidoreductase
is similar to:
PaperBLAST

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

33% id,
98% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

33% id,
98% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

32% id,
98% cov

More...

P735_RS0103765 WP_019386674.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

32% id,
100% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

32% id,
100% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

32% id,
100% cov

More...

P735_RS0105425 WP_019386995.1: bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

32% id,
98% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

31% id,
98% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

31% id,
98% cov

More...

P735_RS0113025 WP_026010128.1: gluconate 5-dehydrogenase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

31% id,
98% cov

6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol

30% id,
97% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

29% id,
97% cov

More...

P735_RS0104635 WP_026009966.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

5jo9A / Q89FN7: Structural characterization of the thermostable bradyrhizobium japonicum d-sorbitol dehydrogenase

30% id,
97% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

33% id,
83% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

35% id,
71% cov

More...

P735_RS0113005 WP_019388481.1: SDR family oxidoreductase
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
96% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

28% id,
97% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

28% id,
96% cov

More...

P735_RS0109800 WP_019387854.1: SDR family oxidoreductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

27% id,
100% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

26% id,
98% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

25% id,
100% cov

More...

P735_RS0107995 WP_019387499.1: SDR family oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

27% id,
89% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

32% id,
70% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

31% id,
70% cov

More...

P735_RS0114225 WP_026010150.1: SDR family oxidoreductase
is similar to:
PaperBLAST

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

24% id,
98% cov

P735_RS0114700 WP_019388808.1: SDR family oxidoreductase
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
75% cov

GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum

29% id,
70% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
70% cov

P735_RS0101460 WP_019386220.1: SDR family oxidoreductase
is similar to:
PaperBLAST

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides

25% id,
78% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

25% id,
72% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

25% id,
72% cov

More...

P735_RS0114520 WP_019388773.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

41% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory