Searching in Leptospirillum ferrooxidans C2-3 (GCF_000284315.1)
Found 12 curated entries in PaperBLAST's database that match '4.1.2.19' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Leptospirillum ferrooxidans C2-3, or try another query
| mtnB LFE_RS04255 LFE_0829 WP_014449030.1: methylthioribulose 1-phosphate dehydratase is similar to: | PaperBLAST |
R4NQF0: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Thermotoga maritima | 26% id, 94% cov |
| fabG LFE_RS09965 LFE_1936 WP_014450097.1: 3-oxoacyl-[acyl-carrier-protein] reductase is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 27% id, 38% cov |
| LFE_RS05950 LFE_1155 WP_014449336.1: SDR family oxidoreductase is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 25% id, 26% cov |
| LFE_RS11445 LFE_2227 WP_014450383.1: SDR family oxidoreductase is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 25% id, 26% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 29% id, 15% cov |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 29% id, 15% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1167446-1168171 (frame +2) on NC_017094.1 Leptospirillum ferrooxidans C2-3, complete sequence is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 28% id, 28% cov |
Lawrence Berkeley National Laboratory