Curated BLAST for Genomes

 

Curated BLAST

Searching in Leptospirillum ferrooxidans C2-3 (GCF_000284315.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Leptospirillum ferrooxidans C2-3, or try another query

LFE_RS03485 LFE_0684 WP_014448891.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

53% id,
97% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

50% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

47% id,
100% cov

guaA LFE_RS03735 LFE_0730 WP_014448937.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

29% id,
99% cov

carA LFE_RS03670 LFE_0719 WP_014448926.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

36% id,
79% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

34% id,
77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory