Curated BLAST for Genomes

 

Curated BLAST

Searching in Leptospirillum ferrooxidans C2-3 (GCF_000284315.1)

Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Leptospirillum ferrooxidans C2-3, or try another query

LFE_RS02030 LFE_0401 WP_014448615.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

36% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory