Curated BLAST for Genomes

 

Curated BLAST

Searching in Actinomyces timonensis DSM 23838 7400942 (GCF_000295095.1)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.150' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Actinomyces timonensis DSM 23838 7400942, or try another query

A1QA_RS0111065 WP_017178971.1: 1,4-dihydroxy-2-naphthoyl-CoA synthase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

34% id,
76% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

31% id,
78% cov

CRT_CLOAB / P52046: Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum
crt / P52046: crotonase monomer (EC 4.2.1.74; EC 4.2.1.150) from Clostridium acetobutylicum
P52046: short-chain-enoyl-CoA hydratase (EC 4.2.1.150) from Clostridium acetobutylicum

33% id,
64% cov

More...

A1QA_RS0109335 WP_017178647.1: polyketide synthase
is similar to:
PaperBLAST

crt1 / A5N5C7: crotonase (EC 4.2.1.150) from Clostridium kluyveri

28% id,
85% cov

ECHS1 / Q58DM8: short chain enoyl-CoA hydratase subunit (EC 4.2.1.150) from Bos taurus

26% id,
82% cov

CRCH_SYNWW / Q0AVM1: Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei

25% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory