Curated BLAST for Genomes

 

Curated BLAST

Searching in Galbibacter marinus ck-I2-15 (GCF_000300875.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Galbibacter marinus ck-I2-15, or try another query

I215_RS15275 I215_15360 WP_008992894.1: ROK family protein
is similar to:
PaperBLAST

PPGK_MYCTA / A5U654: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis
PPGK_MYCTU / P9WIN1: Polyphosphate glucokinase; Poly(P) glucokinase; ATP-dependent glucokinase; Polyphosphate--glucose phosphotransferase; EC 2.7.1.63; EC 2.7.1.2 from Mycobacterium tuberculosis

40% id,
90% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

28% id,
72% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

35% id,
45% cov

More...

galK I215_RS10075 I215_10063 WP_051009182.1: galactokinase
is similar to:
PaperBLAST

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

32% id,
98% cov

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

35% id,
91% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

34% id,
85% cov

I215_RS14450 I215_14531 WP_008992736.1: ROK family protein
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

27% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory