Curated BLAST for Genomes

 

Curated BLAST

Searching in Galbibacter marinus ck-I2-15 (GCF_000300875.1)

Found 8 curated entries in PaperBLAST's database that match '5.1.3.32' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Galbibacter marinus ck-I2-15, or try another query

rhaM I215_RS02175 I215_02168 WP_008990309.1: L-rhamnose mutarotase
is similar to:
PaperBLAST

RHAM_RHILT / Q7BSH1: L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Rhizobium leguminosarum
rhaU / Q7BSH1: L-rhamnose mutarotase monomer (EC 5.1.3.32) from Rhizobium leguminosarum
Q7BSH1: L-rhamnose mutarotase (EC 5.1.3.32) from Rhizobium leguminosarum

54% id,
97% cov

PLH21_FORAG / T2KM13: L-rhamnose mutarotase; P21_mutarotase; Polysaccharide utilization locus H protein P21; PUL H protein P21; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Formosa agariphila

50% id,
100% cov

RHAM_ECOLI / P32156: L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Escherichia coli
YiiL / b3901: L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli
rhaM / P32156: L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli
P32156: L-rhamnose mutarotase (EC 5.1.3.32) from Escherichia coli

41% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory