Curated BLAST for Genomes

 

Curated BLAST

Searching in Oscillibacter ruminantium GH1 (GCF_000307265.1)

Found 19 curated entries in PaperBLAST's database that match '1.1.1.18' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Oscillibacter ruminantium GH1, or try another query

ON16_RS00750 WP_040658603.1: Gfo/Idh/MocA family oxidoreductase
is similar to:
PaperBLAST

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

25% id,
85% cov

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

28% id,
60% cov

ON16_RS09080 WP_051131653.1: Gfo/Idh/MocA family oxidoreductase
is similar to:
PaperBLAST

Q5KYQ3: inositol 2-dehydrogenase (EC 1.1.1.18) from Geobacillus kaustophilus

28% id,
53% cov

E1U888: inositol 2-dehydrogenase (EC 1.1.1.18) from Lacticaseibacillus casei

32% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

293821-294825 (frame -1) on NZ_DF158898.1 Oscillibacter ruminantium GH1, whole genome shotgun sequence
is similar to:
PaperBLAST

iolG / A0A0H3FQ94: myo-inositol 2-dehydrogenase (EC 1.1.1.18) from Klebsiella aerogenes

22% id,
70% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory