Curated BLAST for Genomes

 

Curated BLAST

Searching in Oscillibacter ruminantium GH1 (GCF_000307265.1)

Found 42 curated entries in PaperBLAST's database that match '1.4.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Oscillibacter ruminantium GH1, or try another query

gdhA ON16_RS10305 WP_040662046.1: NADP-specific glutamate dehydrogenase
is similar to:
PaperBLAST

DHE2_CLOSY / P24295: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Clostridium symbiosum
P24295: glutamate dehydrogenase (EC 1.4.1.2) from [Clostridium] symbiosum

67% id,
100% cov

Q9TVN3: glutamate dehydrogenase (EC 1.4.1.2) from Entodinium caudatum

53% id,
100% cov

P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima

35% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory