Curated BLAST for Genomes

 

Curated BLAST

Searching in Oscillibacter ruminantium GH1 (GCF_000307265.1)

Found 185 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Oscillibacter ruminantium GH1, or try another query

ON16_RS06835 WP_040660580.1: glycoside hydrolase family 13 protein
is similar to:
PaperBLAST

MalZ / b0403: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
malZ / P21517: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
P21517: alpha-glucosidase (EC 3.2.1.20) from Escherichia coli

31% id,
85% cov

AIZ92452.1: α-glucosidase Z (EO53_16270;MalZ;b0403) (EC 3.2.1.20)
BAE76183.1: maltodextrin glucosidase (MalZ) (EC 3.2.1.20)

31% id,
85% cov

MAL2_DROME / P07191: Maltase A2; Larval visceral protein D; EC 3.2.1.20 from Drosophila melanogaster
AAF59088.1: α-glucosidase D (LvpD) (EC 3.2.1.20)

26% id,
62% cov

More...

ON16_RS04215 WP_040659648.1: dipeptide epimerase
is similar to:
PaperBLAST

Q2PCE2: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

28% id,
83% cov

ON16_RS00755 WP_040658605.1: glycosyltransferase family 2 protein
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

28% id,
29% cov

glgB ON16_RS12650 WP_040663283.1: 1,4-alpha-glucan branching protein GlgB
is similar to:
PaperBLAST

AAB82328.1: α-glucosidase 2 (Mav2) (EC 3.2.1.20)

28% id,
26% cov

MALT_CULPI / Q95WY5: Alpha-glucosidase; Binary toxin-binding alpha-glucosidase; Culex pipiens maltase 1; Cpm1; EC 3.2.1.20 from Culex pipiens
AAL05443.1: α-glucosidase / maltase 1 (Cpm1) (binary toxin-binding) (EC 3.2.1.20)

31% id,
16% cov

AAF71997.1: α-glucosidase (EC 3.2.1.20)

28% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory