Curated BLAST for Genomes

 

Curated BLAST

Searching in Thauera aminoaromatica S2 (GCF_000310185.1)

Found 14 curated entries in PaperBLAST's database that match '1.1.1.71' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Thauera aminoaromatica S2, or try another query

C665_RS10585 C665_10726 WP_004308554.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum

48% id,
95% cov

C665_RS14850 C665_15068 WP_004319055.1: SDR family oxidoreductase
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

29% id,
100% cov

fabG C665_RS05895 C665_05990 WP_004302726.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

30% id,
90% cov

had C665_RS04310 C665_04401 WP_004301084.1: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q9HMB6: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp.

28% id,
89% cov

D4GP73: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii

29% id,
75% cov

C665_RS14985 C665_15203 WP_231570673.1: zinc-dependent alcohol dehydrogenase family protein
is similar to:
PaperBLAST

Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum

28% id,
88% cov

C665_RS00995 C665_01022 WP_004265908.1: 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

30% id,
78% cov

C665_RS01140 C665_01137 WP_004266003.1: beta-ketoacyl-ACP reductase
is similar to:
PaperBLAST

Q9HBH5: NADP-retinol dehydrogenase (EC 1.1.1.300); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Homo sapiens

26% id,
75% cov

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

25% id,
60% cov

C665_RS11570 C665_11737 WP_004310250.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

CBR1_RAT / P47727: Carbonyl reductase [NADPH] 1; 15-hydroxyprostaglandin dehydrogenase [NADP(+)]; 20-beta-hydroxysteroid dehydrogenase; Alcohol dehydrogenase [NAD(P)+] CBR1; NADPH-dependent carbonyl reductase 1; Prostaglandin 9-ketoreductase; PG-9-KR; Prostaglandin-E(2) 9-reductase; EC 1.1.1.184; EC 1.1.1.196; EC 1.1.1.197; EC 1.1.1.71; EC 1.1.1.189 from Rattus norvegicus

30% id,
51% cov

C665_RS11615 C665_11784 WP_211207584.1: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

D4GP73: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloferax volcanii

27% id,
51% cov

Q9HMB6: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp.

37% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

14031-15770 (frame -2) on NZ_AMXD01000058.1 Thauera aminoaromatica S2 Cont58, whole genome shotgun sequence
is similar to:
PaperBLAST

Q8H0L8: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Solanum tuberosum
Also see hits to annotated proteins above

47% id,
97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory