Curated BLAST for Genomes

 

Curated BLAST

Searching in Thauera aminoaromatica S2 (GCF_000310185.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.8.6' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Thauera aminoaromatica S2, or try another query

C665_RS15135 C665_15363 WP_004321123.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

90% id,
100% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

89% id,
99% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

84% id,
99% cov

More...

C665_RS12450 C665_12619 WP_004312069.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

35% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

34% id,
94% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

34% id,
94% cov

More...

C665_RS19360 C665_19654 WP_004328657.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

33% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

33% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

30% id,
94% cov

C665_RS13930 C665_14143 WP_004315427.1: isovaleryl-CoA dehydrogenase
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

33% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

32% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

32% id,
94% cov

More...

C665_RS17980 C665_18257 WP_004325531.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

27% id,
84% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

27% id,
84% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

29% id,
57% cov

More...

C665_RS04205 C665_04286 WP_040828542.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

25% id,
87% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

26% id,
44% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

31% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory