Curated BLAST for Genomes

 

Curated BLAST

Searching in Thauera aminoaromatica S2 (GCF_000310185.1)

Found 61 curated entries in PaperBLAST's database that match '1.8.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 20 relevant proteins in Thauera aminoaromatica S2, or try another query

lpdA C665_RS14655 C665_14873 WP_004317825.1: dihydrolipoyl dehydrogenase
is similar to:		 PaperBLAST

DLDH_ECOLI / P0A9P0: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli
Lpd / b0116: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
lpd / SP|P0A9P1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli
lpd / P0A9P0: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

 62% id,
100% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 73% id,
83% cov

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 62% id,
98% cov

More...

lpdA C665_RS17245 C665_17509 WP_004324186.1: dihydrolipoyl dehydrogenase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 63% id,
96% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

 57% id,
99% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 57% id,
99% cov

More...

gorA C665_RS16395 C665_16637 WP_004323013.1: glutathione-disulfide reductase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 49% id,
92% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

 38% id,
96% cov

SMc03204: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Sinorhizobium meliloti

 35% id,
97% cov

More...

C665_RS18455 C665_18717 WP_004326337.1: bifunctional TVP38/TMEM64 family protein/FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

 36% id,
96% cov

SMc03204: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Sinorhizobium meliloti

 36% id,
97% cov

A0A0H2ZB32: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 35% id,
97% cov

More...

C665_RS04305 C665_04396 WP_004301082.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

 44% id,
74% cov

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

 27% id,
48% cov

SMc03204: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Sinorhizobium meliloti

 24% id,
51% cov

More...

ahpF C665_RS02475 C665_02497 WP_004299305.1: alkyl hydroperoxide reductase subunit F
is similar to:		 PaperBLAST

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

 27% id,
68% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

 25% id,
61% cov

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

 23% id,
57% cov

More...

nirB C665_RS16440 C665_16682 WP_004323082.1: nitrite reductase large subunit NirB
is similar to:		 PaperBLAST

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 28% id,
63% cov

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

 27% id,
51% cov

C665_RS08960 C665_09105 WP_004306144.1: crotonase/enoyl-CoA hydratase family protein
is similar to:		 PaperBLAST

SMc03204: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Sinorhizobium meliloti

 26% id,
61% cov

C665_RS03645 C665_03691 WP_004300499.1: FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

 27% id,
55% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 27% id,
55% cov

A5N930: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Clostridium kluyveri

 31% id,
41% cov

C665_RS14580 C665_14791 WP_004317135.1: electron transfer flavoprotein-ubiquinone oxidoreductase
is similar to:		 PaperBLAST

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

 25% id,
49% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

 42% id,
10% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 42% id,
10% cov

More...

C665_RS02630 C665_02662 WP_004299478.1: glutamate synthase subunit beta
is similar to:		 PaperBLAST

A4V929: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Acidianus ambivalens

 25% id,
48% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

 30% id,
21% cov

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

 43% id,
8% cov

C665_RS19570 C665_19879 WP_306415023.1: biotin/lipoyl-containing protein
is similar to:		 PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 61% id,
18% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 54% id,
17% cov

C665_RS18250 C665_18507 WP_004326005.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

A0A0H2ZB32: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

 28% id,
37% cov

C665_RS01365 C665_01352 WP_004298196.1: acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
is similar to:		 PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 66% id,
16% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 62% id,
16% cov

C665_RS06350 C665_06444 WP_004303209.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

LPD1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Candida albicans

 25% id,
39% cov

DLDH_CHATD / G0SB20: Dihydrolipoamide dehydrogenase; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Chaetomium thermophilum

 27% id,
20% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; DLD; 2-oxoglutarate dehydrogenase complex component E3; OGDC-E3; OGDHC subunit E3; Alpha-ketoglutarate dehydrogenase complex subunit E3; alpha-KGDHC subunit E3; Dihydrolipoamide dehydrogenase; Dihydrolipoamide:NAD(+) oxidoreductase; Glycine decarboxylase complex subunit L; GDC subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; PDC subunit E3; PDH complex subunit E3; EC 1.8.1.4 from Saccharomyces cerevisiae

 31% id,
14% cov

C665_RS02600 C665_02632 WP_004299454.1: FAD-dependent oxidoreductase
is similar to:		 PaperBLAST

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

 25% id,
36% cov

C665_RS13700 C665_13906 WP_004314941.1: hypothetical protein
is similar to:		 PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 33% id,
20% cov

C665_RS03410 C665_03452 WP_004300084.1: biotin/lipoyl-containing protein
is similar to:		 PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

 32% id,
20% cov

C665_RS10635 C665_10776 WP_012585014.1: uroporphyrinogen-III C-methyltransferase
is similar to:		 PaperBLAST

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

 37% id,
14% cov

trxB C665_RS07480 C665_07593 WP_004304459.1: thioredoxin-disulfide reductase
is similar to:		 PaperBLAST

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

 31% id,
14% cov

PS417_17560: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas simiae

 41% id,
10% cov

DLDH1_PSEPU / P09063: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of branched-chain alpha-keto acid dehydrogenase complex; LPD-Val; EC 1.8.1.4 from Pseudomonas putida

 42% id,
9% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

10467-11177 (frame -3) on NZ_AMXD01000033.1 Thauera aminoaromatica S2 Cont33, whole genome shotgun sequence
is similar to:		 PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum
Also see hits to annotated proteins above

 31% id,
13% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory