Curated BLAST for Genomes

 

Curated BLAST

Searching in Thauera aminoaromatica S2 (GCF_000310185.1)

Found 7 curated entries in PaperBLAST's database that match '2.6.1.78' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Thauera aminoaromatica S2, or try another query

C665_RS07050 C665_07166 WP_004303932.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
Q56232: aspartate-prephenate aminotransferase (EC 2.6.1.78) from Thermus thermophilus

38% id,
99% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

32% id,
97% cov

Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

30% id,
99% cov

More...

C665_RS07170 C665_07286 WP_004304070.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
Q56232: aspartate-prephenate aminotransferase (EC 2.6.1.78) from Thermus thermophilus

32% id,
95% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

29% id,
92% cov

Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

28% id,
94% cov

More...

C665_RS02955 C665_02982 WP_004299657.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
Q56232: aspartate-prephenate aminotransferase (EC 2.6.1.78) from Thermus thermophilus

30% id,
92% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

29% id,
94% cov

Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

26% id,
98% cov

More...

C665_RS05355 C665_05458 WP_004302128.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
Q56232: aspartate-prephenate aminotransferase (EC 2.6.1.78) from Thermus thermophilus

28% id,
91% cov

PAT_ARATH / Q9SIE1: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; AtAAT; AtPPA-AT; Protein MATERNAL EFFECT EMBRYO ARREST 17; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Arabidopsis thaliana
Q9SIE1: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Arabidopsis thaliana

22% id,
56% cov

C665_RS18315 C665_18572 WP_004326068.1: PatB family C-S lyase
is similar to:
PaperBLAST

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

26% id,
99% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
Q56232: aspartate-prephenate aminotransferase (EC 2.6.1.78) from Thermus thermophilus

27% id,
93% cov

PAT_PETHY / E9L7A5: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida

25% id,
77% cov

More...

rffA C665_RS02775 C665_02807 WP_004299592.1: dTDP-4-amino-4,6-dideoxygalactose transaminase
is similar to:
PaperBLAST

Q02635: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti

33% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory