Curated BLAST for Genomes

 

Curated BLAST

Searching in Thauera aminoaromatica S2 (GCF_000310185.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Thauera aminoaromatica S2, or try another query

C665_RS17905 C665_18177 WP_004325323.1: ROK family protein
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

50% id,
98% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

51% id,
95% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

32% id,
99% cov

More...

C665_RS11860 C665_12034 WP_004310852.1: glucokinase
is similar to:
PaperBLAST

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

39% id,
38% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

38% id,
38% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

33% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory