Curated BLAST for Genomes

 

Curated BLAST

Searching in Thauera aminoaromatica S2 (GCF_000310185.1)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Thauera aminoaromatica S2, or try another query

cysK C665_RS12845 C665_13019 WP_004313067.1: cysteine synthase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 51% id,
94% cov

C665_RS15845 C665_16078 WP_004322211.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 46% id,
95% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 44% id,
98% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 44% id,
95% cov

More...

cysM C665_RS02175 C665_02173 WP_004299063.1: cysteine synthase CysM
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 42% id,
97% cov

C665_RS10670 C665_10811 WP_004308709.1: PLP-dependent aspartate aminotransferase family protein
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 41% id,
99% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 41% id,
97% cov

CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum

 40% id,
95% cov

More...

C665_RS12780 C665_12954 WP_004312943.1: bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:		 PaperBLAST

mecB: cystathionine gamma-lyase; EC 4.4.1.1 from Emericella nidulans
B2LXT6: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus nidulans

 35% id,
92% cov

Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa

 29% id,
94% cov

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 43% id,
56% cov

More...

C665_RS18315 C665_18572 WP_004326068.1: PatB family C-S lyase
is similar to:		 PaperBLAST

6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine

 31% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory