Searching in Catellicoccus marimammalium M35/04/3 (GCF_000313915.1)
Found 52 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).
These curated entries have 43 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Catellicoccus marimammalium M35/04/3, or try another query
trxB C683_RS03890 C683_0771 WP_009490208.1: thioredoxin-disulfide reductase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 23% id, 65% cov |
C683_RS01225 C683_0241 WP_009488515.1: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase is similar to: | PaperBLAST |
SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis | 30% id, 43% cov |
Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp. | 29% id, 43% cov |
Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis | 29% id, 43% cov |
C683_RS01370 C683_0269 WP_009488543.1: NAD(P)/FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 45% id, 8% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
62049-63356 (frame +3) on NZ_AMYT01000008.1 Catellicoccus marimammalium M35/04/3 contig00008, whole genome shotgun sequence is similar to: | PaperBLAST |
Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus | 39% id, 11% cov |
Lawrence Berkeley National Laboratory