Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulforamulus hydrothermalis Lam5 = DSM 18033 type strain: Lam5 = DSM 18033 (GCF_000315365.1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulforamulus hydrothermalis Lam5 = DSM 18033 type strain: Lam5 = DSM 18033, or try another query

DESHY_RS10060 DESHY_60007 WP_082210482.1: PfkB family carbohydrate kinase
is similar to:		 PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

 50% id,
97% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

 50% id,
97% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

 50% id,
95% cov

More...

DESHY_RS02610 DESHY_110311 WP_008410212.1: hexokinase
is similar to:		 PaperBLAST

HXK1 / Q42525: fructokinase (EC 2.7.1.4; EC 2.7.1.1) from Arabidopsis thaliana

 35% id,
88% cov

HXK1 / P04806: hexokinase 1 (EC 2.7.1.4; EC 2.7.1.1; EC 2.7.1.7) from Saccharomyces cerevisiae

 32% id,
94% cov

HXK2 / P04807: hexokinase 2 (EC 2.7.1.4; EC 2.7.1.1; EC 2.7.1.7) from Saccharomyces cerevisiae

 31% id,
94% cov

More...

rbsK DESHY_RS05400 DESHY_160038 WP_008411030.1: ribokinase
is similar to:		 PaperBLAST

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

 31% id,
99% cov

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

 30% id,
100% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

 30% id,
98% cov

More...

pfkB DESHY_RS03310 DESHY_110454 WP_048817829.1: 1-phosphofructokinase
is similar to:		 PaperBLAST

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

 30% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory