Curated BLAST for Genomes

 

Curated BLAST

Searching in Cronobacter condimenti 1330 (GCF_000319285.1)

Found 10 curated entries in PaperBLAST's database that match '2.7.1.58' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Cronobacter condimenti 1330, or try another query

BN137_RS08150 BN137_2458 WP_007674732.1: 2-dehydro-3-deoxygalactonokinase
is similar to:
PaperBLAST

DGOK_ECOLI / P31459: 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase; EC 2.7.1.58 from Escherichia coli
YidV / b3693: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178; EC 2.7.1.58) from Escherichia coli

70% id,
100% cov

A6TFZ6: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Klebsiella pneumoniae

69% id,
100% cov

ABZR86_RS01225: 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Dyella japonica

43% id,
93% cov

More...

BN137_RS15355 BN137_768 WP_007666240.1: aminoimidazole riboside kinase
is similar to:
PaperBLAST

KDGK2_HALVD / D4GR05: 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxygalactonate kinase; KDGal kinase; KDGK-2; EC 2.7.1.58 from Haloferax volcanii
D4GR05: 6-phosphofructokinase (EC 2.7.1.11); 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Haloferax volcanii

25% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory