Curated BLAST for Genomes

 

Curated BLAST

Searching in Cronobacter condimenti 1330 (GCF_000319285.1)

Found 13 curated entries in PaperBLAST's database that match '3.1.1.15' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Cronobacter condimenti 1330, or try another query

BN137_RS00940 BN137_4117 WP_032984929.1: SMP-30/gluconolactonase/LRE family protein
is similar to:
PaperBLAST

PfGW456L13_2118: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas fluorescens

33% id,
98% cov

Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp.

36% id,
89% cov

PS417_11020: L-arabinolactonase (EC 3.1.1.15) from Pseudomonas simiae

33% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory